CRAN Package Check Results for Maintainer Ravi Varadhan <ravi.varadhan at jhu.edu>

CRAN Package Check Results for Maintainer ‘Ravi Varadhan <ravi.varadhan at jhu.edu>’

Last updated on 2025-09-28 03:50:38 CEST.

Package	FAIL	ERROR	NOTE	OK
alabama			2	11
anoint				13
condMVNorm				13
crrstep				13
dfoptim			2	11
DSBayes			2	11
FastHamming				13
features				13
resilience		1		12
SQUAREM	1		12
turboEM				13

Package alabama

Current CRAN status: NOTE: 2, OK: 11

Package anoint

Current CRAN status: OK: 13

Package condMVNorm

Current CRAN status: OK: 13

Package crrstep

Current CRAN status: OK: 13

Package dfoptim

Current CRAN status: NOTE: 2, OK: 11

Version: 2023.1.0
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Ravi Varadhan <ravi.varadhan@jhu.edu>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Ravi", family = "Varadhan", role = c("aut", "cre"), email = "ravi.varadhan@jhu.edu"), person(given = c("Johns", "Hopkins"), family = "University"), person(given = c("Hans", "W."), family = "Borchers", role = "aut"), person(given = c("ABB", "Corporate"), family = "Research"), person(given = "Vincent", family = "Bechard", role = "aut"), person(given = "HEC", family = "Montreal", comment = "Montreal University")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package DSBayes

Current CRAN status: NOTE: 2, OK: 11

Package FastHamming

Current CRAN status: OK: 13

Package features

Current CRAN status: OK: 13

Package resilience

Current CRAN status: ERROR: 1, OK: 12

Version: 2024.1.2
Check: examples
Result: ERROR Running examples in 'resilience-Ex.R' failed The error most likely occurred in: > ### Name: prepost > ### Title: Identifying Predictors of Resilience to Stressors in Single-Arm > ### Studies of Pre-Post Change > ### Aliases: prepost > ### Keywords: pre-post resilience > > ### ** Examples > > data(tkr) > > names(tkr.dat) [1] "gender" "age" "bmi" "smoker" "post.Y" "pre.Y" > dim(tkr.dat) [1] 900 6 > > # pre-post change regression > ans1 <- prepost(post.Y ~ pre.Y + I(age-mean(age)) + I((age - mean(age))^2) + + bmi + gender + as.factor(smoker), data=tkr.dat, k=c(1.2, 1.5), nboot=200) > print(ans1) $naive.beta Estimate Std. Error t value Pr(>|t|) (Intercept) 19.7178591032 2.854492335 6.9076588 1.191603e-11 pre.Y -0.5979748068 0.030782785 -19.4256242 1.992061e-66 I(age - mean(age)) 0.0020523577 0.048759433 0.0420915 9.664389e-01 I((age - mean(age))^2) 0.0008103525 0.005131442 0.1579190 8.745704e-01 bmi -0.1790450020 0.052487064 -3.4112215 6.874338e-04 genderMale 1.3079861675 0.602779392 2.1699252 3.037969e-02 as.factor(smoker)no 1.3707020605 1.583720839 0.8654947 3.870916e-01 as.factor(smoker)yes -2.2213288479 2.389996267 -0.9294277 3.530179e-01 $corrected.beta k=1.2 k=1.5 (Intercept) 19.717859103 19.717859103 pre.Y -0.148764227 -0.302731778 I(age - mean(age)) 0.094717733 0.062956547 I((age - mean(age))^2) 0.004770432 0.003413109 bmi -0.040613971 -0.088061399 genderMale 0.426967826 0.728938087 as.factor(smoker)no 2.601359096 2.179549688 as.factor(smoker)yes -0.844440110 -1.316370638 $CI $CI$`k=1.2` lower upper (Intercept) 14.988040670 25.24105215 pre.Y -0.180513217 -0.10748431 I(age - mean(age)) -0.016416274 0.19076828 I((age - mean(age))^2) -0.005233055 0.01585068 bmi -0.146727801 0.08834430 genderMale -0.879873296 1.82622768 as.factor(smoker)no -0.088273089 4.93073417 as.factor(smoker)yes -6.440499998 3.70797768 $CI$`k=1.5` lower upper (Intercept) 14.820600380 24.97768084 pre.Y -0.353361215 -0.25161228 I(age - mean(age)) -0.042182715 0.14992547 I((age - mean(age))^2) -0.006212543 0.01551306 bmi -0.185765248 0.01307941 genderMale -0.599896402 1.82571041 as.factor(smoker)no -0.390565197 4.99516690 as.factor(smoker)yes -6.712479005 3.35686339 > > # Post regression > ans2 <- prepost(post.Y ~ pre.Y + I(age-mean(age)) + I((age - mean(age))^2) + + bmi + gender + as.factor(smoker), data=tkr.dat, + k=c(1.2, 1.5), change=FALSE, nboot=200, boot.method="norm") Error in { : task 2 failed - "creation of server socket failed: port 11962 cannot be opened" Calls: prepost -> %dopar% -> <Anonymous> Execution halted Flavor: r-devel-windows-x86_64

Package SQUAREM

Current CRAN status: FAIL: 1, NOTE: 12

Version: 2021.1
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Ravi Varadhan <ravi.varadhan@jhu.edu>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: person(given = "Ravi", family = "Varadhan", role = c("aut", "cre"), email = "ravi.varadhan@jhu.edu") as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2021.1
Check: package dependencies
Result: FAIL
Flavor: r-devel-linux-x86_64-debian-clang

Version: 2021.1
Check: Rd files
Result: NOTE checkRd: (-1) fpiter.Rd:55-58: Lost braces 55 | \code{tol}{ - a small, positive scalar that determines when iterations | ^ checkRd: (-1) fpiter.Rd:60-61: Lost braces 60 | \code{maxiter}{ - an integer denoting the maximum limit on the number of | ^ checkRd: (-1) fpiter.Rd:63-65: Lost braces 63 | \code{trace}{ - a logical variable denoting whether some of the intermediate | ^ checkRd: (-1) fpiter.Rd:67-70: Lost braces 67 | \code{intermed}}{ - a logical variable denoting whether the intermediate | ^ checkRd: (-1) squarem.Rd:134: Lost braces 134 | along with the corresponding log-likelihood value. When the code{objfn} is not specified it will return the fixed-point residual instead of the objective function values. | ^ Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2021.1
Check: for unstated dependencies in ‘demo’
Result: NOTE 'library' or 'require' call not declared from: ‘interval’ Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Package turboEM

Current CRAN status: OK: 13