Last updated on 2026-02-04 04:50:44 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| cohortBuilder | 3 | 10 | |
| hypothesis | 10 | 3 | |
| queryBuilder | 13 | ||
| shinyCohortBuilder | 10 | 3 | |
| shinyGizmo | 13 | ||
| shinyQueryBuilder | 13 |
Current CRAN status: ERROR: 3, OK: 10
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(cohortBuilder)
Attaching package: 'cohortBuilder'
The following objects are masked from 'package:stats':
filter, step
>
> test_check("cohortBuilder")
Saving _problems/test-filter-63.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 270 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-filter.R:63:3'): Multi discrete filter works fine ──────────────
Error in `dplyr::filter(., dplyr::across(!!names(values), ~col_in_val(.x, values[[dplyr::cur_column()]], !!keep_na)))`: i In argument: `dplyr::across(...)`.
Caused by error:
! `..1` must be a logical vector, not a <tbl_df/tbl/data.frame> object.
i If you used `across()` to generate this data frame, please use `if_any()` or `if_all()` instead.
Backtrace:
▆
1. ├─coh$run_flow() at test-filter.R:63:3
2. │ └─self$run_step(data_idx) at cohortBuilder/R/cohort_methods.R:633:9
3. │ └─temp_data_object %>% data_filter$filter_data() at cohortBuilder/R/cohort_methods.R:656:9
4. ├─data_filter$filter_data(.)
5. │ └─data_object[[dataset]] %>% ... at cohortBuilder/R/source_tblist.R:587:7
6. ├─dplyr::filter(...)
7. ├─dplyr:::filter.data.frame(...)
8. │ └─dplyr:::filter_impl(...)
9. │ └─dplyr:::filter_rows(...)
10. │ └─dplyr:::filter_eval(...)
11. │ ├─base::withCallingHandlers(...)
12. │ └─mask$eval_all_filter(dots_expanded, invert, env_filter)
13. │ └─dplyr (local) eval()
14. ├─dplyr:::dplyr_internal_error(...)
15. │ └─rlang::abort(class = c(class, "dplyr:::internal_error"), dplyr_error_data = data)
16. │ └─rlang:::signal_abort(cnd, .file)
17. │ └─base::signalCondition(cnd)
18. └─dplyr (local) `<fn>`(`<dpl:::__>`)
19. └─rlang::abort(message, class = error_class, parent = parent, call = error_call)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 270 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(cohortBuilder)
Attaching package: 'cohortBuilder'
The following objects are masked from 'package:stats':
filter, step
>
> test_check("cohortBuilder")
Saving _problems/test-filter-63.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 270 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-filter.R:63:3'): Multi discrete filter works fine ──────────────
Error in `dplyr::filter(., dplyr::across(!!names(values), ~col_in_val(.x, values[[dplyr::cur_column()]], !!keep_na)))`: i In argument: `dplyr::across(...)`.
Caused by error:
! `..1` must be a logical vector, not a <tbl_df/tbl/data.frame> object.
i If you used `across()` to generate this data frame, please use `if_any()` or `if_all()` instead.
Backtrace:
▆
1. ├─coh$run_flow() at test-filter.R:63:3
2. │ └─self$run_step(data_idx) at cohortBuilder/R/cohort_methods.R:633:9
3. │ └─temp_data_object %>% data_filter$filter_data() at cohortBuilder/R/cohort_methods.R:656:9
4. ├─data_filter$filter_data(.)
5. │ └─data_object[[dataset]] %>% ... at cohortBuilder/R/source_tblist.R:587:7
6. ├─dplyr::filter(...)
7. ├─dplyr:::filter.data.frame(...)
8. │ └─dplyr:::filter_impl(...)
9. │ └─dplyr:::filter_rows(...)
10. │ └─dplyr:::filter_eval(...)
11. │ ├─base::withCallingHandlers(...)
12. │ └─mask$eval_all_filter(dots_expanded, invert, env_filter)
13. │ └─dplyr (local) eval()
14. ├─dplyr:::dplyr_internal_error(...)
15. │ └─rlang::abort(class = c(class, "dplyr:::internal_error"), dplyr_error_data = data)
16. │ └─rlang:::signal_abort(cnd, .file)
17. │ └─base::signalCondition(cnd)
18. └─dplyr (local) `<fn>`(`<dpl:::__>`)
19. └─rlang::abort(message, class = error_class, parent = parent, call = error_call)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 270 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/24s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(cohortBuilder)
Attaching package: 'cohortBuilder'
The following objects are masked from 'package:stats':
filter, step
>
> test_check("cohortBuilder")
Saving _problems/test-filter-63.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 270 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-filter.R:63:3'): Multi discrete filter works fine ──────────────
Error in `dplyr::filter(., dplyr::across(!!names(values), ~col_in_val(.x, values[[dplyr::cur_column()]], !!keep_na)))`: i In argument: `dplyr::across(...)`.
Caused by error:
! `..1` must be a logical vector, not a <tbl_df/tbl/data.frame> object.
i If you used `across()` to generate this data frame, please use `if_any()` or `if_all()` instead.
Backtrace:
▆
1. ├─coh$run_flow() at test-filter.R:63:3
2. │ └─self$run_step(data_idx) at cohortBuilder/R/cohort_methods.R:633:9
3. │ └─temp_data_object %>% data_filter$filter_data() at cohortBuilder/R/cohort_methods.R:656:9
4. ├─data_filter$filter_data(.)
5. │ └─data_object[[dataset]] %>% ... at cohortBuilder/R/source_tblist.R:587:7
6. ├─dplyr::filter(...)
7. ├─dplyr:::filter.data.frame(...)
8. │ └─dplyr:::filter_impl(...)
9. │ └─dplyr:::filter_rows(...)
10. │ └─dplyr:::filter_eval(...)
11. │ ├─base::withCallingHandlers(...)
12. │ └─mask$eval_all_filter(dots_expanded, invert, env_filter)
13. │ └─dplyr (local) eval()
14. ├─dplyr:::dplyr_internal_error(...)
15. │ └─rlang::abort(class = c(class, "dplyr:::internal_error"), dplyr_error_data = data)
16. │ └─rlang:::signal_abort(cnd, .file)
17. │ └─base::signalCondition(cnd)
18. └─dplyr (local) `<fn>`(`<dpl:::__>`)
19. └─rlang::abort(message, class = error_class, parent = parent, call = error_call)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 270 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 10, OK: 3
Version: 1.1.0
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘hypothesis-api.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 10, OK: 3
Version: 0.3.1
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘filter_discrete.R’ ‘filter_query.R’ ‘renders.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Current CRAN status: NOTE: 13
Version: 0.4.2
Check: Rd files
Result: NOTE
checkRd: (-1) js_calls.Rd:63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) js_calls.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) js_calls.Rd:65-66: Lost braces in \itemize; meant \describe ?
checkRd: (-1) js_calls.Rd:67: Lost braces in \itemize; meant \describe ?
checkRd: (-1) js_calls.Rd:68: Lost braces in \itemize; meant \describe ?
checkRd: (-1) js_calls.Rd:69: Lost braces in \itemize; meant \describe ?
checkRd: (-1) pickCheckboxNamesAndLabels.Rd:14: Lost braces
14 | \item{choices}{link{pickCheckboxInput} choices list.}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13