Last updated on 2026-02-04 04:50:34 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| cleanepi | 13 | ||
| readepi | 1 | 3 | 9 |
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, NOTE: 3, OK: 9
Version: 1.0.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘design_principle.Rmd’ using rmarkdown
--- finished re-building ‘design_principle.Rmd’
--- re-building ‘install_drivers.Rmd’ using rmarkdown
--- finished re-building ‘install_drivers.Rmd’
--- re-building ‘query_parameters.Rmd’ using rmarkdown
--- finished re-building ‘query_parameters.Rmd’
--- re-building ‘readepi.Rmd’ using rmarkdown
Quitting from readepi.Rmd:334-350 [unnamed-chunk-25]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/vctrs_error_subscript_oob>
Error in `data[, target_columns]`:
! Can't subset columns that don't exist.
✖ Column `date_admission` doesn't exist.
---
Backtrace:
▆
1. └─readepi::read_sormas(...)
2. └─readepi:::sormas_get_cases_data(...)
3. └─readepi:::convert_to_date(...)
4. ├─base::rbind(apply(data[, target_columns], 2, substract_and_convert))
5. ├─base::apply(data[, target_columns], 2, substract_and_convert)
6. ├─data[, target_columns]
7. └─tibble:::`[.tbl_df`(data, , target_columns)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'readepi.Rmd' failed with diagnostics:
Can't subset columns that don't exist.
✖ Column `date_admission` doesn't exist.
--- failed re-building ‘readepi.Rmd’
<pool> Checked-out object deleted before being returned.
<pool> Make sure to `poolReturn()` all objects retrieved with `poolCheckout().`
SUMMARY: processing the following file failed:
‘readepi.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.4
Check: installed package size
Result: NOTE
installed size is 6.3Mb
sub-directories of 1Mb or more:
doc 5.8Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64