* using log directory 'd:/Rcompile/CRANpkg/local/4.4/portalr.Rcheck'
* using R version 4.4.2 (2024-10-31 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'portalr/DESCRIPTION' ... OK
* this is package 'portalr' version '0.4.3'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'portalr' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s] OK
* checking whether the package can be unloaded cleanly ... [1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s] OK
* checking loading without being on the library search path ... [1s] OK
* checking whether startup messages can be suppressed ... [1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [6s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [1s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [303s] ERROR
  Running 'testthat.R' [303s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(portalr)
  > 
  > test_check("portalr")
  Downloading version `5.125.0` of the data...
  Downloading version `5.125.0` of the data...
  [ FAIL 1 | WARN 2 | SKIP 43 | PASS 81 ]
  
  ══ Skipped tests (43) ══════════════════════════════════════════════════════════
  • On CRAN (43): 'test-01-data-retrieval.R:5:5',
    'test-01-data-retrieval.R:41:5', 'test-01-data-retrieval.R:48:5',
    'test-01-data-retrieval.R:63:5', 'test-01-data-retrieval.R:78:5',
    'test-01-data-retrieval.R:99:5', 'test-03-summarize-rodents.R:6:3',
    'test-03-summarize-rodents.R:32:3', 'test-03-summarize-rodents.R:38:3',
    'test-03-summarize-rodents.R:60:3', 'test-03-summarize-rodents.R:85:3',
    'test-03-summarize-rodents.R:110:3', 'test-03-summarize-rodents.R:129:3',
    'test-03-summarize-rodents.R:195:3', 'test-99-regression.R:8:3',
    'test-99-regression.R:18:3', 'test-99-regression.R:26:3',
    'test-99-regression.R:44:3', 'test-99-regression.R:68:3',
    'test-99-regression.R:78:3', 'test-99-regression.R:87:3',
    'test-99-regression.R:100:3', 'test-99-regression.R:109:3',
    'test-99-regression.R:118:3', 'test-99-regression.R:130:3',
    'test-99-regression.R:141:3', 'test-99-regression.R:153:3',
    'test-99-regression.R:162:3', 'test-99-regression.R:171:3',
    'test-99-regression.R:181:3', 'test-99-regression.R:195:3',
    'test-99-regression.R:207:3', 'test-99-regression.R:215:3',
    'test-99-regression.R:227:3', 'test-99-regression.R:235:3',
    'test-99-regression.R:247:3', 'test-99-regression.R:255:3',
    'test-99-regression.R:267:3', 'test-99-regression.R:280:3',
    'test-99-regression.R:290:3', 'test-99-regression.R:300:3',
    'test-99-regression.R:318:3', 'test-99-regression.R:330:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-02-data-processing.R:8:1'): (code run outside of `test_that()`) ──
  Error in `UseMethod("left_join")`: no applicable method for 'left_join' applied to an object of class "c('simpleWarning', 'warning', 'condition')"
  Backtrace:
      ▆
   1. ├─portalr::load_rodent_data(portal_data_path) at test-02-data-processing.R:8:1
   2. │ └─portalr:::clean_data(...)
   3. │   └─... %>% unique()
   4. ├─base::unique(.)
   5. ├─dplyr::select(., dplyr::all_of(columns_to_keep))
   6. ├─dplyr::filter(., .data$qcflag == 1)
   7. └─dplyr::left_join(., trapping_table, ...)
  
  [ FAIL 1 | WARN 2 | SKIP 43 | PASS 81 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [5s] OK
* checking PDF version of manual ... [22s] OK
* checking HTML version of manual ... [5s] OK
* DONE
Status: 1 ERROR