* using log directory 'd:/Rcompile/CRANpkg/local/4.3/ordbetareg.Rcheck' * using R version 4.3.3 (2024-02-29 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'ordbetareg/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'ordbetareg' version '0.8' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ordbetareg' can be installed ... OK * checking installed package size ... NOTE installed size is 7.2Mb sub-directories of 1Mb or more: data 5.2Mb doc 1.8Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [4s] OK * checking whether the package can be loaded with stated dependencies ... [5s] OK * checking whether the package can be unloaded cleanly ... [5s] OK * checking whether the namespace can be loaded with stated dependencies ... [4s] OK * checking whether the namespace can be unloaded cleanly ... [5s] OK * checking loading without being on the library search path ... [4s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [15s] NOTE posterior_epred_ordbeta_prep: no visible global function definition for '%||%' Undefined global functions or variables: %||% * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [12s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [9s] ERROR Running examples in 'ordbetareg-Ex.R' failed The error most likely occurred in: > ### Name: posterior_epred_ordbeta.brmsfit > ### Title: Calculate Probability of Response Components > ### Aliases: posterior_epred_ordbeta.brmsfit posterior_epred_ordbeta > > ### ** Examples > > > data('ord_fit_mean') > > # use function to calculate probability of top end of scale > > pr_1s <- posterior_epred_ordbeta(ord_fit_mean,component="top") Error in incl_thres %||% FALSE : could not find function "%||%" Calls: posterior_epred_ordbeta ... posterior_epred_ordbeta.brmsfit -> posterior_epred_ordbeta_prep -> as_one_logical Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [35s] ERROR Error(s) in re-building vignettes: --- re-building 'package_introduction.qmd' using html processing file: package_introduction.qmd Error in `incl_thres %||% FALSE`: ! could not find function "%||%" Backtrace: ▆ 1. ├─... %>% hist 2. ├─graphics::hist(.) 3. ├─ordbetareg::posterior_epred_ordbeta(ord_fit_mean, component = "top") 4. └─ordbetareg:::posterior_epred_ordbeta.brmsfit(ord_fit_mean, component = "top") 5. └─ordbetareg:::posterior_epred_ordbeta_prep(...) 6. └─ordbetareg:::as_one_logical(incl_thres %||% FALSE) Quitting from lines 260-269 [posterior_epred_ordbeta] (package_introduction.qmd) Execution halted Error: processing vignette 'package_introduction.qmd' failed with diagnostics: ✖ Error running quarto cli. Caused by error: ! System command 'quarto.exe' failed --- failed re-building 'package_introduction.qmd' SUMMARY: processing the following file failed: 'package_introduction.qmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [17s] OK * checking HTML version of manual ... [3s] OK * DONE Status: 2 ERRORs, 2 NOTEs