* using log directory 'd:/Rcompile/CRANpkg/local/4.4/matrixCorr.Rcheck' * using R version 4.4.3 (2025-02-28 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'matrixCorr/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'matrixCorr' version '0.8.3' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'matrixCorr' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 13.3.0' * checking C++ specification ... OK Not all R platforms support C++17 * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [4s] OK * checking whether the package can be loaded with stated dependencies ... [4s] OK * checking whether the package can be unloaded cleanly ... [4s] OK * checking whether the namespace can be loaded with stated dependencies ... [4s] OK * checking whether the namespace can be unloaded cleanly ... [4s] OK * checking loading without being on the library search path ... [4s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [20s] OK * checking Rd files ... [2s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking examples ... [23s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [20s] ERROR Running 'testthat.R' [19s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(matrixCorr) > > test_check("matrixCorr") Saving _problems/test_biweight_mid_corr-158.R [ FAIL 1 | WARN 0 | SKIP 5 | PASS 416 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test_bland_altman_repeated.R:103:3', 'tests_schafer_corr.R:120:3', 'tests_schafer_corr.R:138:3', 'tests_schafer_corr.R:172:3', 'tests_schafer_corr.R:257:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_biweight_mid_corr.R:158:3'): threading does not change results beyond tiny numerical noise ── Expected `R1` to equal `R2`. Differences: actual vs expected [, 1] [, 2] [, 3] [, 4] [, 5] [, 6] [, 7] [, 8] [, 9] [,10] [,11] [,12] [,13] [,14] [,15] [,16] [,17] [,18] [,19] [,20] - actual[1, ] 1.0000000000 -0.0140785587 0.023951990 -0.0014034733 -0.0355030685 -0.032243443 0.051647311 -0.043267140 -0.045275646 -0.0004818199 -0.030835074 0.0383685180 0.0020483151 -0.013047296 -0.111334714 0.0224342613 -0.0118449491 -0.065026941 -0.073869806 -0.027178325 + expected[1, ] 1.0000000000 -0.0140785587 0.023951990 -0.0014034733 -0.0355030685 NaN 0.051647311 -0.043267140 -0.045275646 -0.0004818199 -0.030835074 0.0383685180 0.0020483151 -0.013047296 -0.111334714 0.0224342613 -0.0118449491 -0.065026941 -0.073869806 -0.027178325 - actual[2, ] -0.0140785587 1.0000000000 0.007737748 -0.0213330403 -0.0055258314 0.003063168 0.028408103 -0.031507603 0.088620776 0.0823708910 -0.015443737 0.0009664715 0.0371425767 0.042295843 -0.057061642 -0.0724853729 0.0441249231 0.011785231 -0.089117299 -0.065559255 + expected[2, ] -0.0140785587 1.0000000000 0.007737748 -0.0213330403 -0.0055258314 NaN 0.028408103 -0.031507603 0.088620776 0.0823708910 -0.015443737 0.0009664715 0.0371425767 0.042295843 -0.057061642 -0.0724853729 0.0441249231 0.011785231 -0.089117299 -0.065559255 - actual[3, ] 0.0239519897 0.0077377475 1.000000000 -0.0369926906 -0.1002197498 0.047787903 0.001164342 -0.034535938 0.026225644 -0.0504061821 0.111839064 0.0019500980 -0.0273638323 -0.009884259 0.014970878 0.0221797757 0.0770754219 0.055930685 0.027205195 0.037412159 + expected[3, ] 0.0239519897 0.0077377475 1.000000000 -0.0369926906 -0.1002197498 NaN 0.001164342 -0.034535938 0.026225644 -0.0504061821 0.111839064 0.0019500980 -0.0273638323 -0.009884259 0.014970878 0.0221797757 0.0770754219 0.055930685 0.027205195 0.037412159 - actual[4, ] -0.0014034733 -0.0213330403 -0.036992691 1.0000000000 0.0006591784 0.052627378 -0.015724524 0.115669515 0.009403222 -0.0079591842 -0.064539243 -0.0823447179 0.0117770634 -0.008133163 0.022219905 0.0009760598 -0.0081766039 -0.037042569 0.010209042 0.019041397 + expected[4, ] -0.0014034733 -0.0213330403 -0.036992691 1.0000000000 0.0006591784 NaN -0.015724524 0.115669515 0.009403222 -0.0079591842 -0.064539243 -0.0823447179 0.0117770634 -0.008133163 0.022219905 0.0009760598 -0.0081766039 -0.037042569 0.010209042 0.019041397 - actual[5, ] -0.0355030685 -0.0055258314 -0.100219750 0.0006591784 1.0000000000 0.015693712 -0.028168495 0.049872767 0.007638964 -0.0240313615 0.023043784 -0.0117861829 -0.0111140291 -0.043132474 0.007862862 -0.0142392465 0.0266946793 0.042874028 0.071367111 -0.021259898 + expected[5, ] -0.0355030685 -0.0055258314 -0.100219750 0.0006591784 1.0000000000 NaN -0.028168495 0.049872767 0.007638964 -0.0240313615 0.023043784 -0.0117861829 -0.0111140291 -0.043132474 0.007862862 -0.0142392465 0.0266946793 0.042874028 0.071367111 -0.021259898 - actual[6, ] -0.0322434435 0.0030631683 0.047787903 0.0526273776 0.0156937123 1.000000000 -0.066528521 -0.007064756 -0.069850659 -0.0673002915 -0.046601460 0.0577264651 0.0161138708 0.073012228 -0.081875152 -0.0238301773 -0.0272201954 0.088916413 0.022910920 0.071407820 + expected[6, ] NaN NaN NaN NaN NaN 1.000000000 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN - actual[7, ] 0.0516473107 0.0284081026 0.001164342 -0.0157245243 -0.0281684949 -0.066528521 1.000000000 -0.005528187 0.046870914 -0.0670663653 -0.063798670 0.0246781219 0.0431141090 -0.041576671 0.049804221 -0.0065179588 -0.0718418709 0.010326353 -0.019190670 -0.032692702 + expected[7, ] 0.0516473107 0.0284081026 0.001164342 -0.0157245243 -0.0281684949 NaN 1.000000000 -0.005528187 0.046870914 -0.0670663653 -0.063798670 0.0246781219 0.0431141090 -0.041576671 0.049804221 -0.0065179588 -0.0718418709 0.010326353 -0.019190670 -0.032692702 - actual[8, ] -0.0432671396 -0.0315076034 -0.034535938 0.1156695146 0.0498727670 -0.007064756 -0.005528187 1.000000000 0.024223522 0.0078790023 0.029729827 0.0095176961 0.0582667378 -0.011616783 0.064377463 -0.0209425296 -0.0322612212 0.063143092 -0.024142024 0.009270637 + expected[8, ] -0.0432671396 -0.0315076034 -0.034535938 0.1156695146 0.0498727670 NaN -0.005528187 1.000000000 0.024223522 0.0078790023 0.029729827 0.0095176961 0.0582667378 -0.011616783 0.064377463 -0.0209425296 -0.0322612212 0.063143092 -0.024142024 0.009270637 - actual[9, ] -0.0452756464 0.0886207764 0.026225644 0.0094032219 0.0076389636 -0.069850659 0.046870914 0.024223522 1.000000000 0.0230088476 0.150798758 0.0147446621 -0.0517356868 0.038572908 0.037323031 0.0686049499 0.1179444524 0.046739269 0.054566044 0.018179459 + expected[9, ] -0.0452756464 0.0886207764 0.026225644 0.0094032219 0.0076389636 NaN 0.046870914 0.024223522 1.000000000 0.0230088476 0.150798758 0.0147446621 -0.0517356868 0.038572908 0.037323031 0.0686049499 0.1179444524 0.046739269 0.054566044 0.018179459 - actual[10, ] -0.0004818199 0.0823708910 -0.050406182 -0.0079591842 -0.0240313615 -0.067300292 -0.067066365 0.007879002 0.023008848 1.0000000000 -0.026803296 -0.0530535353 -0.0505096147 0.021450492 0.051012759 0.0300665451 0.0796128869 0.002154069 -0.024504844 0.031736932 + expected[10, ] -0.0004818199 0.0823708910 -0.050406182 -0.0079591842 -0.0240313615 NaN -0.067066365 0.007879002 0.023008848 1.0000000000 -0.026803296 -0.0530535353 -0.0505096147 0.021450492 0.051012759 0.0300665451 0.0796128869 0.002154069 -0.024504844 0.031736932 and 10 more ... [ FAIL 1 | WARN 0 | SKIP 5 | PASS 416 ] Error: ! Test failures. Execution halted * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... [12s] OK * DONE Status: 1 ERROR