* using log directory 'd:/Rcompile/CRANpkg/local/4.6/simDAG.Rcheck' * using R Under development (unstable) (2026-03-09 r89583 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * current time: 2026-03-10 12:46:06 UTC * checking for file 'simDAG/DESCRIPTION' ... OK * this is package 'simDAG' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'simDAG' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [2s] OK * checking whether the package can be unloaded cleanly ... [2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s] OK * checking whether the namespace can be unloaded cleanly ... [2s] OK * checking loading without being on the library search path ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [14s] OK * checking Rd files ... [2s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [28s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [107s] ERROR Running 'testthat.R' [106s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(simDAG) > library(testthat) > library(data.table) Attaching package: 'data.table' The following object is masked from 'package:base': %notin% > library(igraph) Attaching package: 'igraph' The following object is masked from 'package:testthat': compare The following objects are masked from 'package:stats': decompose, spectrum The following object is masked from 'package:base': union > library(ggdag) Attaching package: 'ggdag' The following object is masked from 'package:stats': filter > > data.table::setDTthreads(1) > > test_check("simDAG") Saving _problems/test_network-458.R Saving _problems/test_node_lmer-15.R Saving _problems/test_node_lmer-46.R Saving _problems/test_node_lmer-79.R Saving _problems/test_node_lmer-172.R Saving _problems/test_node_lmer-202.R Saving _problems/test_node_lmer-233.R Saving _problems/test_node_lmer-266.R Saving _problems/test_node_lmer-294.R Saving _problems/test_node_lmer-308.R Saving _problems/test_node_lmer-363.R Saving _problems/test_node_lmer-387.R t = 1 node = sickness2 t = 1 node = sickness1 t = 2 node = sickness2 t = 2 node = sickness1 t = 3 node = sickness2 t = 3 node = sickness1 t = 4 node = sickness2 t = 4 node = sickness1 t = 5 node = sickness2 t = 5 node = sickness1 starting worker pid=66744 on localhost:11864 at 13:49:11.716 starting worker pid=46852 on localhost:11864 at 13:49:11.723 | | | 0%Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools | |======= | 10% | |============== | 20% | |===================== | 30% | |============================ | 40% | |=================================== | 50% | |========================================== | 60% | |================================================= | 70% | |======================================================== | 80% | |=============================================================== | 90% | |======================================================================| 100%starting worker pid=38992 on localhost:11864 at 13:49:14.216 starting worker pid=42276 on localhost:11864 at 13:49:14.235 Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: simDAG Loading required package: rngtools loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools starting worker pid=59976 on localhost:11864 at 13:49:17.530 starting worker pid=79248 on localhost:11864 at 13:49:17.559 Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools starting worker pid=90940 on localhost:11864 at 13:49:21.043 starting worker pid=65164 on localhost:11864 at 13:49:21.079 | | | 0%Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools | |======= | 10% | |============== | 20% | |===================== | 30% | |============================ | 40% | |=================================== | 50% | |========================================== | 60% | |================================================= | 70% | |======================================================== | 80% | |=============================================================== | 90% | |======================================================================| 100%starting worker pid=47836 on localhost:11864 at 13:49:24.123 starting worker pid=86244 on localhost:11864 at 13:49:24.151 | | | 0%Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: simDAG Loading required package: foreach Loading required package: rngtools loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools | |=================================== | 50% | |======================================================================| 100%starting worker pid=47416 on localhost:11864 at 13:49:26.606 starting worker pid=43964 on localhost:11864 at 13:49:26.627 | | | 0%Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools Loading required package: simDAG loaded simDAG and set parent environment Attaching package: 'data.table' The following object is masked from 'package:base': %notin% Loading required package: foreach Loading required package: rngtools | |=================================== | 50% | |======================================================================| 100%[ FAIL 12 | WARN 14 | SKIP 54 | PASS 1012 ] ══ Skipped tests (54) ══════════════════════════════════════════════════════════ • On CRAN (54): 'test_DAG.network_S3.r:4:1', 'test_DAG.network_S3.r:10:1', 'test_DAG.network_S3.r:18:1', 'test_DAG.network_S3.r:24:1', 'test_DAG.network_S3.r:32:1', 'test_DAG.network_S3.r:44:1', 'test_DAG.network_S3.r:50:1', 'test_DAG.network_S3.r:58:1', 'test_DAG.network_S3.r:64:1', 'test_DAG.network_S3.r:72:1', 'test_DAG.node_S3.r:4:1', 'test_DAG.node_S3.r:9:1', 'test_DAG.node_S3.r:14:1', 'test_DAG.node_S3.r:19:1', 'test_DAG.node_S3.r:24:1', 'test_DAG.node_S3.r:32:1', 'test_DAG.node_S3.r:37:1', 'test_DAG.node_S3.r:42:1', 'test_DAG.node_S3.r:47:1', 'test_DAG.node_S3.r:52:1', 'test_dag.r:14:1', 'test_dag.r:21:1', 'test_dag.r:34:1', 'test_dag.r:44:1', 'test_dag.r:51:1', 'test_dag.r:64:1', 'test_node.r:548:1', 'test_plot.DAG.r:11:1', 'test_plot.DAG.r:15:1', 'test_plot.DAG.r:19:1', 'test_plot.DAG.r:23:1', 'test_plot.DAG.r:27:1', 'test_plot.DAG.r:31:1', 'test_plot.DAG.r:35:1', 'test_plot.DAG.r:40:1', 'test_plot.DAG.r:44:1', 'test_plot.DAG.r:52:1', 'test_plot.DAG.r:59:1', 'test_plot.DAG.r:64:1', 'test_plot.DAG.r:69:1', 'test_plot.DAG.r:100:1', 'test_plot.DAG.r:104:1', 'test_plot.DAG.r:108:1', 'test_plot.simDT.r:24:1', 'test_plot.simDT.r:28:1', 'test_plot.simDT.r:32:1', 'test_plot.simDT.r:36:1', 'test_plot.simDT.r:40:1', 'test_plot.simDT.r:48:1', 'test_plot.simDT.r:56:1', 'test_simDT_S3.r:11:1', 'test_simDT_S3.r:15:1', 'test_simDT_S3.r:20:1', 'test_simDT_S3.r:25:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_network.r:458:3'): mixing net() and mixed terms in formula syntax ── Expected `round(mean(data$Y), 3)` to equal `-5.3`. Differences: `actual`: -5.3020 `expected`: -5.3000 ── Failure ('test_node_lmer.r:15:3'): simple random effect ───────────────────── Expected `round(mean(data$Y), 3)` to equal `-1.99`. Differences: `actual`: -1.9950 `expected`: -1.9900 ── Failure ('test_node_lmer.r:46:3'): simple random effect in disrete-time simulation ── Expected `round(mean(data$Y), 3)` to equal `-1.852`. Differences: `actual`: -1.864 `expected`: -1.852 ── Failure ('test_node_lmer.r:79:3'): simple random effect + categorical fixed effect ── Expected `round(mean(data$Y), 3)` to equal `-0.513`. Differences: `actual`: -0.5190 `expected`: -0.5130 ── Failure ('test_node_lmer.r:172:3'): simple random effect + cubic terms ────── Expected `round(mean(data$Y), 3)` to equal `-1.797`. Differences: `actual`: -1.8020 `expected`: -1.7970 ── Failure ('test_node_lmer.r:202:3'): simple random effect + ONLY cubic terms ── Expected `round(mean(data$Y), 3)` to equal `-1.851`. Differences: `actual`: -1.8560 `expected`: -1.8510 ── Failure ('test_node_lmer.r:233:3'): multiple random effects ───────────────── Expected `round(mean(data$Y), 3)` to equal `-2.179`. Differences: `actual`: -2.1780 `expected`: -2.1790 ── Failure ('test_node_lmer.r:266:3'): with random effects and random slopes ─── Expected `round(mean(data$Y), 3)` to equal `-1.974`. Differences: `actual`: -1.9790 `expected`: -1.9740 ── Failure ('test_node_lmer.r:294:3'): mixed model term with + in it ─────────── Expected `round(mean(data$Y), 3)` to equal `-2.365`. Differences: `actual`: -2.3610 `expected`: -2.3650 ── Failure ('test_node_lmer.r:308:3'): works with function input ─────────────── Expected `round(mean(data$Y), 3)` to equal `-2.365`. Differences: `actual`: -2.3610 `expected`: -2.3650 ── Failure ('test_node_lmer.r:363:3'): random effects with net() syntax ──────── Expected `round(mean(data$Y), 3)` to equal `-5.299`. Differences: `actual`: -5.3000 `expected`: -5.2990 ── Failure ('test_node_lmer.r:387:3'): simple random effect with non-default link ── Expected `round(mean(data$Y), 3)` to equal `-1.99`. Differences: `actual`: -1.9950 `expected`: -1.9900 [ FAIL 12 | WARN 14 | SKIP 54 | PASS 1012 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [83s] OK * checking PDF version of manual ... [23s] OK * checking HTML version of manual ... [19s] OK * DONE Status: 1 ERROR