Analysis of Host-Associated Microbiomes from Hybrid Organisms

Documentation for package ‘HybridMicrobiomes’ version 0.1.1

FourHbootstrap	Bootstraps of the incidence-based 4H Index
FourHbootstrapA	Bootstraps of the abundance-based 4H Index
FourHcentroid	Centroid of bootstrapped 4H-indices
FourHcompare	Tests whether multiple systems have significantly different 4H-indices
FourHnull	Bootstrapped null models of the 4H-index
FourHnullplane	Null Plane
FourHnullplaneD	Bootstrap Distribution Around the Null Plane
FourHpreanalysis	Bootstraps of the percentage of gamma diversity that is core
FourHquaternary	Plot bootstrapped 4H-indices
FourHquaternaryC	Plot centroid of bootstrapped 4H-indices