Similarity and Distance Quantification Between Probability Functions

---

Documentation for package ‘philentropy’ version 0.9.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

additive_symm_chi_sq	Additive symmetric chi-squared distance (lowlevel function)
avg	AVG distance (lowlevel function)
bhattacharyya	Bhattacharyya distance (lowlevel function)
binned.kernel.est	Kernel Density Estimation
canberra	Canberra distance (lowlevel function)
CE	Shannon's Conditional-Entropy H(X | Y)
chebyshev	Chebyshev distance (lowlevel function)
clark_sq	Clark squared distance (lowlevel function)
cosine_dist	Cosine distance (lowlevel function)
czekanowski	Czekanowski distance (lowlevel function)
dice_dist	Dice distance (lowlevel function)
dist.diversity	Distance Diversity between Probability Density Functions
distance	Distances and Similarities between Probability Density Functions
dist_many_many	Distances and Similarities between Many Probability Density Functions
dist_one_many	Distances and Similarities between One and Many Probability Density Functions
dist_one_one	Distances and Similarities between Two Probability Density Functions
divergence_sq	Divergence squared distance (lowlevel function)
estimate.probability	Estimate Probability Vectors From Count Vectors
euclidean	Euclidean distance (lowlevel function)
fidelity	Fidelity distance (lowlevel function)
getDistMethods	Get method names for 'distance'
gJSD	Generalized Jensen-Shannon Divergence
gower	Gower distance (lowlevel function)
H	Shannon's Entropy H(X)
harmonic_mean_dist	Harmonic mean distance (lowlevel function)
hellinger	Hellinger distance (lowlevel function)
inner_product	Inner product distance (lowlevel function)
intersection_dist	Intersection distance (lowlevel function)
jaccard	Jaccard distance (lowlevel function)
JE	Shannon's Joint-Entropy H(X,Y)
jeffreys	Jeffreys distance (lowlevel function)
jensen_difference	Jensen difference (lowlevel function)
jensen_shannon	Jensen-Shannon distance (lowlevel function)
JSD	Jensen-Shannon Divergence
KL	Kullback-Leibler Divergence
kulczynski_d	Kulczynski_d distance (lowlevel function)
kullback_leibler_distance	kullback-Leibler distance (lowlevel function)
kumar_hassebrook	Kumar hassebrook distance (lowlevel function)
kumar_johnson	Kumar-Johnson distance (lowlevel function)
k_divergence	K-Divergence (lowlevel function)
lin.cor	Linear Correlation
lorentzian	Lorentzian distance (lowlevel function)
manhattan	Manhattan distance (lowlevel function)
matusita	Matusita distance (lowlevel function)
MI	Shannon's Mutual Information I(X,Y)
minkowski	Minkowski distance (lowlevel function)
motyka	Motyka distance (lowlevel function)
neyman_chi_sq	Neyman chi-squared distance (lowlevel function)
pearson_chi_sq	Pearson chi-squared distance (lowlevel function)
prob_symm_chi_sq	Probability symmetric chi-squared distance (lowlevel function)
ruzicka	Ruzicka distance (lowlevel function)
soergel	Soergel distance (lowlevel function)
sorensen	Sorensen distance (lowlevel function)
squared_chi_sq	Squared chi-squared distance (lowlevel function)
squared_chord	Squared chord distance (lowlevel function)
squared_euclidean	Squared euclidean distance (lowlevel function)
taneja	Taneja difference (lowlevel function)
tanimoto	Tanimoto distance (lowlevel function)
topsoe	Topsoe distance (lowlevel function)
wave_hedges	Wave hedges distance (lowlevel function)