Systematical Metabolic Reconstruction
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Documentation for package ‘Sysrecon’ version 0.1.3
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| contentTypes | A data frame contains the labels and groups of the contents of metabolic reconstruction |
| conversionMatrix | A data frame contains the details of the transformation of the metabolic reconstruction |
| conversionTypes | A data frame contains the labels and groups of the transformation of metabolic reconstruction |
| draw_conversion_tree | draw_conversion_tree |
| draw_step_tree | draw_step_tree |
| get_term_matrix | get_term_matrix |
| inputTxt | inputTxt |
| label | systemrecon-class |
| map_word_to_step | map_word_to_step |
| matrixProcess | A data frame produced by the function map_word_to_step |
| matrixProcessConversion | A data frame produced by the function map_word_to_step |
| matrixProcessFile | A data frame produced by the function map_to_word in the function vizProcess |
| slots | slotsFunction |
| slotsFunction | slotsFunction |
| stepsMatrix | A data frame contains the details of the steps of the metabolic reconstruction |
| stepTypes | A data frame contains the labels and groups of the steps of metabolic reconstruction |
| Sysrecon | Sysrecon |
| systemrecon-class | systemrecon-class |
| text | A list of characters from the inputTxt. |
| toolsMatrix | A data frame contains the details of the databases and tools of the metabolic reconstruction |
| toolsTypes | A data frame contains the labels and groups of the databases and tools of metabolic reconstruction |
| vizProcess | vizProcess |
| vizTools | vizTools |
| vizTransformation | vizTransformation |
| wordsMatrix | A data frame produced by the function get_term_matrix |